staphtype software program Search Results


staphtype software version 1.4  (Ridom GmbH)
90
Ridom GmbH staphtype software version 1.4
Staphtype Software Version 1.4, supplied by Ridom GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/staphtype+software+program/staphtype+software/pmc01828992-50-68-72
Average 90 stars, based on 1 article reviews
staphtype software version 1.4 - by Bioz Stars, 2026-09
90/100 stars
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ridom staphtype software  (Ridom GmbH)
90
Ridom GmbH ridom staphtype software
Population structure of the tested MRSA isolates ( n = 34) based on BURP analysis. This analysis was performed using the Based Upon Repeat Pattern (BURP) algorithm of the Ridom <t>StaphType</t> software (Ridom GmbH, Würzburg, Germany) at a cost setting of ≤ 5 and excluding spa -types with 5 or fewer repeats. Each dot represents a different spa type, with the diameter of the dot being proportional to the quantity of the corresponding spa type. Clusters of linked spa types correspond to spa clonal complexes ( spa -CCs). The predict founder of a cluster (which was used for defining the cluster) is shown in blue, while the others in black. Near the lines of connection, the mutations involved in the transition from a spa type to the next one are reported in detail. All DNA changes are meant to occur from the founder to the periphery. Legend: numbers along the lines refer to the repeat sequence involved in the mutation; +indicates the acquisition of a repeat sequence; - indicates the loss of a repeat sequence; within circles the numbers of the strains of each CC appear between brackets. In summary, the analysis identified a single clonal complex ( spa -CC223) comprising spa types t223, t14339, t3689, and t8506; n = 20 isolates, and accounted for 58.8% of all tested MRSA isolates, as well as 3 singletons (t267, t084, and t1339; n = 12 isolates, 35.2%), while excluded 2 isolates (t380, 5.8%) from the clustering, as they consisted of four repeat units only.
Ridom Staphtype Software, supplied by Ridom GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/staphtype+software+program/ridom+staphtype+software/pmc05547136-186-15-17
Average 90 stars, based on 1 article reviews
ridom staphtype software - by Bioz Stars, 2026-09
90/100 stars
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staphtype 2.0.3 software  (Ridom GmbH)
90
Ridom GmbH staphtype 2.0.3 software
Population structure of the tested MRSA isolates ( n = 34) based on BURP analysis. This analysis was performed using the Based Upon Repeat Pattern (BURP) algorithm of the Ridom <t>StaphType</t> software (Ridom GmbH, Würzburg, Germany) at a cost setting of ≤ 5 and excluding spa -types with 5 or fewer repeats. Each dot represents a different spa type, with the diameter of the dot being proportional to the quantity of the corresponding spa type. Clusters of linked spa types correspond to spa clonal complexes ( spa -CCs). The predict founder of a cluster (which was used for defining the cluster) is shown in blue, while the others in black. Near the lines of connection, the mutations involved in the transition from a spa type to the next one are reported in detail. All DNA changes are meant to occur from the founder to the periphery. Legend: numbers along the lines refer to the repeat sequence involved in the mutation; +indicates the acquisition of a repeat sequence; - indicates the loss of a repeat sequence; within circles the numbers of the strains of each CC appear between brackets. In summary, the analysis identified a single clonal complex ( spa -CC223) comprising spa types t223, t14339, t3689, and t8506; n = 20 isolates, and accounted for 58.8% of all tested MRSA isolates, as well as 3 singletons (t267, t084, and t1339; n = 12 isolates, 35.2%), while excluded 2 isolates (t380, 5.8%) from the clustering, as they consisted of four repeat units only.
Staphtype 2.0.3 Software, supplied by Ridom GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/staphtype+software+program/staphtype+2+0+3+software/pm21761125-54-6-5
Average 90 stars, based on 1 article reviews
staphtype 2.0.3 software - by Bioz Stars, 2026-09
90/100 stars
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staphtype software 2.2.1  (Ridom GmbH)
90
Ridom GmbH staphtype software 2.2.1
Population structure of the tested MRSA isolates ( n = 34) based on BURP analysis. This analysis was performed using the Based Upon Repeat Pattern (BURP) algorithm of the Ridom <t>StaphType</t> software (Ridom GmbH, Würzburg, Germany) at a cost setting of ≤ 5 and excluding spa -types with 5 or fewer repeats. Each dot represents a different spa type, with the diameter of the dot being proportional to the quantity of the corresponding spa type. Clusters of linked spa types correspond to spa clonal complexes ( spa -CCs). The predict founder of a cluster (which was used for defining the cluster) is shown in blue, while the others in black. Near the lines of connection, the mutations involved in the transition from a spa type to the next one are reported in detail. All DNA changes are meant to occur from the founder to the periphery. Legend: numbers along the lines refer to the repeat sequence involved in the mutation; +indicates the acquisition of a repeat sequence; - indicates the loss of a repeat sequence; within circles the numbers of the strains of each CC appear between brackets. In summary, the analysis identified a single clonal complex ( spa -CC223) comprising spa types t223, t14339, t3689, and t8506; n = 20 isolates, and accounted for 58.8% of all tested MRSA isolates, as well as 3 singletons (t267, t084, and t1339; n = 12 isolates, 35.2%), while excluded 2 isolates (t380, 5.8%) from the clustering, as they consisted of four repeat units only.
Staphtype Software 2.2.1, supplied by Ridom GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/staphtype+software+program/staph+type+2+1+1+software/pmc05389034__srep08188___s1-114-20-19
Average 90 stars, based on 1 article reviews
staphtype software 2.2.1 - by Bioz Stars, 2026-09
90/100 stars
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burst.ridom staphtype software  (Ridom GmbH)
90
Ridom GmbH burst.ridom staphtype software
Population structure of the tested MRSA isolates ( n = 34) based on BURP analysis. This analysis was performed using the Based Upon Repeat Pattern (BURP) algorithm of the Ridom <t>StaphType</t> software (Ridom GmbH, Würzburg, Germany) at a cost setting of ≤ 5 and excluding spa -types with 5 or fewer repeats. Each dot represents a different spa type, with the diameter of the dot being proportional to the quantity of the corresponding spa type. Clusters of linked spa types correspond to spa clonal complexes ( spa -CCs). The predict founder of a cluster (which was used for defining the cluster) is shown in blue, while the others in black. Near the lines of connection, the mutations involved in the transition from a spa type to the next one are reported in detail. All DNA changes are meant to occur from the founder to the periphery. Legend: numbers along the lines refer to the repeat sequence involved in the mutation; +indicates the acquisition of a repeat sequence; - indicates the loss of a repeat sequence; within circles the numbers of the strains of each CC appear between brackets. In summary, the analysis identified a single clonal complex ( spa -CC223) comprising spa types t223, t14339, t3689, and t8506; n = 20 isolates, and accounted for 58.8% of all tested MRSA isolates, as well as 3 singletons (t267, t084, and t1339; n = 12 isolates, 35.2%), while excluded 2 isolates (t380, 5.8%) from the clustering, as they consisted of four repeat units only.
Burst.Ridom Staphtype Software, supplied by Ridom GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/staphtype+software+program/burst+ridom+staphtype+software/pmc02593277-18-31-31
Average 90 stars, based on 1 article reviews
burst.ridom staphtype software - by Bioz Stars, 2026-09
90/100 stars
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ridomstaphtype software  (Ridom GmbH)
90
Ridom GmbH ridomstaphtype software
Population structure of the tested MRSA isolates ( n = 34) based on BURP analysis. This analysis was performed using the Based Upon Repeat Pattern (BURP) algorithm of the Ridom <t>StaphType</t> software (Ridom GmbH, Würzburg, Germany) at a cost setting of ≤ 5 and excluding spa -types with 5 or fewer repeats. Each dot represents a different spa type, with the diameter of the dot being proportional to the quantity of the corresponding spa type. Clusters of linked spa types correspond to spa clonal complexes ( spa -CCs). The predict founder of a cluster (which was used for defining the cluster) is shown in blue, while the others in black. Near the lines of connection, the mutations involved in the transition from a spa type to the next one are reported in detail. All DNA changes are meant to occur from the founder to the periphery. Legend: numbers along the lines refer to the repeat sequence involved in the mutation; +indicates the acquisition of a repeat sequence; - indicates the loss of a repeat sequence; within circles the numbers of the strains of each CC appear between brackets. In summary, the analysis identified a single clonal complex ( spa -CC223) comprising spa types t223, t14339, t3689, and t8506; n = 20 isolates, and accounted for 58.8% of all tested MRSA isolates, as well as 3 singletons (t267, t084, and t1339; n = 12 isolates, 35.2%), while excluded 2 isolates (t380, 5.8%) from the clustering, as they consisted of four repeat units only.
Ridomstaphtype Software, supplied by Ridom GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/staphtype+software+program/ridomstaphtype+software/pm38003773-44-11-13
Average 90 stars, based on 1 article reviews
ridomstaphtype software - by Bioz Stars, 2026-09
90/100 stars
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spa typing software  (Ridom GmbH)
90
Ridom GmbH spa typing software
Population structure of the tested MRSA isolates ( n = 34) based on BURP analysis. This analysis was performed using the Based Upon Repeat Pattern (BURP) algorithm of the Ridom <t>StaphType</t> software (Ridom GmbH, Würzburg, Germany) at a cost setting of ≤ 5 and excluding spa -types with 5 or fewer repeats. Each dot represents a different spa type, with the diameter of the dot being proportional to the quantity of the corresponding spa type. Clusters of linked spa types correspond to spa clonal complexes ( spa -CCs). The predict founder of a cluster (which was used for defining the cluster) is shown in blue, while the others in black. Near the lines of connection, the mutations involved in the transition from a spa type to the next one are reported in detail. All DNA changes are meant to occur from the founder to the periphery. Legend: numbers along the lines refer to the repeat sequence involved in the mutation; +indicates the acquisition of a repeat sequence; - indicates the loss of a repeat sequence; within circles the numbers of the strains of each CC appear between brackets. In summary, the analysis identified a single clonal complex ( spa -CC223) comprising spa types t223, t14339, t3689, and t8506; n = 20 isolates, and accounted for 58.8% of all tested MRSA isolates, as well as 3 singletons (t267, t084, and t1339; n = 12 isolates, 35.2%), while excluded 2 isolates (t380, 5.8%) from the clustering, as they consisted of four repeat units only.
Spa Typing Software, supplied by Ridom GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/staphtype+software+program/spa+typing+software/pmc04662016-52-14-13
Average 90 stars, based on 1 article reviews
spa typing software - by Bioz Stars, 2026-09
90/100 stars
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staphtype 1.5.21 software  (Ridom GmbH)
90
Ridom GmbH staphtype 1.5.21 software
Population structure of the tested MRSA isolates ( n = 34) based on BURP analysis. This analysis was performed using the Based Upon Repeat Pattern (BURP) algorithm of the Ridom <t>StaphType</t> software (Ridom GmbH, Würzburg, Germany) at a cost setting of ≤ 5 and excluding spa -types with 5 or fewer repeats. Each dot represents a different spa type, with the diameter of the dot being proportional to the quantity of the corresponding spa type. Clusters of linked spa types correspond to spa clonal complexes ( spa -CCs). The predict founder of a cluster (which was used for defining the cluster) is shown in blue, while the others in black. Near the lines of connection, the mutations involved in the transition from a spa type to the next one are reported in detail. All DNA changes are meant to occur from the founder to the periphery. Legend: numbers along the lines refer to the repeat sequence involved in the mutation; +indicates the acquisition of a repeat sequence; - indicates the loss of a repeat sequence; within circles the numbers of the strains of each CC appear between brackets. In summary, the analysis identified a single clonal complex ( spa -CC223) comprising spa types t223, t14339, t3689, and t8506; n = 20 isolates, and accounted for 58.8% of all tested MRSA isolates, as well as 3 singletons (t267, t084, and t1339; n = 12 isolates, 35.2%), while excluded 2 isolates (t380, 5.8%) from the clustering, as they consisted of four repeat units only.
Staphtype 1.5.21 Software, supplied by Ridom GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/staphtype+software+program/staphtype+1+5+21+software/pmc04488942-77-19-18
Average 90 stars, based on 1 article reviews
staphtype 1.5.21 software - by Bioz Stars, 2026-09
90/100 stars
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staphytype software version 1.5  (Ridom GmbH)
90
Ridom GmbH staphytype software version 1.5
Population structure of the tested MRSA isolates ( n = 34) based on BURP analysis. This analysis was performed using the Based Upon Repeat Pattern (BURP) algorithm of the Ridom <t>StaphType</t> software (Ridom GmbH, Würzburg, Germany) at a cost setting of ≤ 5 and excluding spa -types with 5 or fewer repeats. Each dot represents a different spa type, with the diameter of the dot being proportional to the quantity of the corresponding spa type. Clusters of linked spa types correspond to spa clonal complexes ( spa -CCs). The predict founder of a cluster (which was used for defining the cluster) is shown in blue, while the others in black. Near the lines of connection, the mutations involved in the transition from a spa type to the next one are reported in detail. All DNA changes are meant to occur from the founder to the periphery. Legend: numbers along the lines refer to the repeat sequence involved in the mutation; +indicates the acquisition of a repeat sequence; - indicates the loss of a repeat sequence; within circles the numbers of the strains of each CC appear between brackets. In summary, the analysis identified a single clonal complex ( spa -CC223) comprising spa types t223, t14339, t3689, and t8506; n = 20 isolates, and accounted for 58.8% of all tested MRSA isolates, as well as 3 singletons (t267, t084, and t1339; n = 12 isolates, 35.2%), while excluded 2 isolates (t380, 5.8%) from the clustering, as they consisted of four repeat units only.
Staphytype Software Version 1.5, supplied by Ridom GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/staphtype+software+program/staph+type+software+version+1+4/pmc07212350-107-15-19
Average 90 stars, based on 1 article reviews
staphytype software version 1.5 - by Bioz Stars, 2026-09
90/100 stars
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automated clonal alert system of the ridom staphtype software  (Ridom GmbH)
90
Ridom GmbH automated clonal alert system of the ridom staphtype software
Population structure of the tested MRSA isolates ( n = 34) based on BURP analysis. This analysis was performed using the Based Upon Repeat Pattern (BURP) algorithm of the Ridom <t>StaphType</t> software (Ridom GmbH, Würzburg, Germany) at a cost setting of ≤ 5 and excluding spa -types with 5 or fewer repeats. Each dot represents a different spa type, with the diameter of the dot being proportional to the quantity of the corresponding spa type. Clusters of linked spa types correspond to spa clonal complexes ( spa -CCs). The predict founder of a cluster (which was used for defining the cluster) is shown in blue, while the others in black. Near the lines of connection, the mutations involved in the transition from a spa type to the next one are reported in detail. All DNA changes are meant to occur from the founder to the periphery. Legend: numbers along the lines refer to the repeat sequence involved in the mutation; +indicates the acquisition of a repeat sequence; - indicates the loss of a repeat sequence; within circles the numbers of the strains of each CC appear between brackets. In summary, the analysis identified a single clonal complex ( spa -CC223) comprising spa types t223, t14339, t3689, and t8506; n = 20 isolates, and accounted for 58.8% of all tested MRSA isolates, as well as 3 singletons (t267, t084, and t1339; n = 12 isolates, 35.2%), while excluded 2 isolates (t380, 5.8%) from the clustering, as they consisted of four repeat units only.
Automated Clonal Alert System Of The Ridom Staphtype Software, supplied by Ridom GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/staphtype+software+program/automated+clonal+alert+system+of+the+ridom+staphtype+software/pmc01325475-7-12-11
Average 90 stars, based on 1 article reviews
automated clonal alert system of the ridom staphtype software - by Bioz Stars, 2026-09
90/100 stars
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spa type assigned using software  (Ridom GmbH)
90
Ridom GmbH spa type assigned using software
Population structure of the tested MRSA isolates ( n = 34) based on BURP analysis. This analysis was performed using the Based Upon Repeat Pattern (BURP) algorithm of the Ridom <t>StaphType</t> software (Ridom GmbH, Würzburg, Germany) at a cost setting of ≤ 5 and excluding spa -types with 5 or fewer repeats. Each dot represents a different spa type, with the diameter of the dot being proportional to the quantity of the corresponding spa type. Clusters of linked spa types correspond to spa clonal complexes ( spa -CCs). The predict founder of a cluster (which was used for defining the cluster) is shown in blue, while the others in black. Near the lines of connection, the mutations involved in the transition from a spa type to the next one are reported in detail. All DNA changes are meant to occur from the founder to the periphery. Legend: numbers along the lines refer to the repeat sequence involved in the mutation; +indicates the acquisition of a repeat sequence; - indicates the loss of a repeat sequence; within circles the numbers of the strains of each CC appear between brackets. In summary, the analysis identified a single clonal complex ( spa -CC223) comprising spa types t223, t14339, t3689, and t8506; n = 20 isolates, and accounted for 58.8% of all tested MRSA isolates, as well as 3 singletons (t267, t084, and t1339; n = 12 isolates, 35.2%), while excluded 2 isolates (t380, 5.8%) from the clustering, as they consisted of four repeat units only.
Spa Type Assigned Using Software, supplied by Ridom GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/staphtype+software+program/spa+type+assigned+using+software/pmc03825640-64-24-27
Average 90 stars, based on 1 article reviews
spa type assigned using software - by Bioz Stars, 2026-09
90/100 stars
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burp algorithm ridom staphtype software v2.2.1  (Ridom GmbH)
90
Ridom GmbH burp algorithm ridom staphtype software v2.2.1
Population structure of the tested MRSA isolates ( n = 34) based on BURP analysis. This analysis was performed using the Based Upon Repeat Pattern (BURP) algorithm of the Ridom <t>StaphType</t> software (Ridom GmbH, Würzburg, Germany) at a cost setting of ≤ 5 and excluding spa -types with 5 or fewer repeats. Each dot represents a different spa type, with the diameter of the dot being proportional to the quantity of the corresponding spa type. Clusters of linked spa types correspond to spa clonal complexes ( spa -CCs). The predict founder of a cluster (which was used for defining the cluster) is shown in blue, while the others in black. Near the lines of connection, the mutations involved in the transition from a spa type to the next one are reported in detail. All DNA changes are meant to occur from the founder to the periphery. Legend: numbers along the lines refer to the repeat sequence involved in the mutation; +indicates the acquisition of a repeat sequence; - indicates the loss of a repeat sequence; within circles the numbers of the strains of each CC appear between brackets. In summary, the analysis identified a single clonal complex ( spa -CC223) comprising spa types t223, t14339, t3689, and t8506; n = 20 isolates, and accounted for 58.8% of all tested MRSA isolates, as well as 3 singletons (t267, t084, and t1339; n = 12 isolates, 35.2%), while excluded 2 isolates (t380, 5.8%) from the clustering, as they consisted of four repeat units only.
Burp Algorithm Ridom Staphtype Software V2.2.1, supplied by Ridom GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/staphtype+software+program/burp+algorithm+ridom+staphtype+software+version+2+2+1/pm27521261-113-8-7
Average 90 stars, based on 1 article reviews
burp algorithm ridom staphtype software v2.2.1 - by Bioz Stars, 2026-09
90/100 stars
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Population structure of the tested MRSA isolates ( n = 34) based on BURP analysis. This analysis was performed using the Based Upon Repeat Pattern (BURP) algorithm of the Ridom StaphType software (Ridom GmbH, Würzburg, Germany) at a cost setting of ≤ 5 and excluding spa -types with 5 or fewer repeats. Each dot represents a different spa type, with the diameter of the dot being proportional to the quantity of the corresponding spa type. Clusters of linked spa types correspond to spa clonal complexes ( spa -CCs). The predict founder of a cluster (which was used for defining the cluster) is shown in blue, while the others in black. Near the lines of connection, the mutations involved in the transition from a spa type to the next one are reported in detail. All DNA changes are meant to occur from the founder to the periphery. Legend: numbers along the lines refer to the repeat sequence involved in the mutation; +indicates the acquisition of a repeat sequence; - indicates the loss of a repeat sequence; within circles the numbers of the strains of each CC appear between brackets. In summary, the analysis identified a single clonal complex ( spa -CC223) comprising spa types t223, t14339, t3689, and t8506; n = 20 isolates, and accounted for 58.8% of all tested MRSA isolates, as well as 3 singletons (t267, t084, and t1339; n = 12 isolates, 35.2%), while excluded 2 isolates (t380, 5.8%) from the clustering, as they consisted of four repeat units only.

Journal: Scientific Reports

Article Title: Carriage frequency, phenotypic, and genotypic characteristics of methicillin-resistant Staphylococcus aureus isolated from dental health-care personnel, patients, and environment

doi: 10.1038/s41598-017-07713-8

Figure Lengend Snippet: Population structure of the tested MRSA isolates ( n = 34) based on BURP analysis. This analysis was performed using the Based Upon Repeat Pattern (BURP) algorithm of the Ridom StaphType software (Ridom GmbH, Würzburg, Germany) at a cost setting of ≤ 5 and excluding spa -types with 5 or fewer repeats. Each dot represents a different spa type, with the diameter of the dot being proportional to the quantity of the corresponding spa type. Clusters of linked spa types correspond to spa clonal complexes ( spa -CCs). The predict founder of a cluster (which was used for defining the cluster) is shown in blue, while the others in black. Near the lines of connection, the mutations involved in the transition from a spa type to the next one are reported in detail. All DNA changes are meant to occur from the founder to the periphery. Legend: numbers along the lines refer to the repeat sequence involved in the mutation; +indicates the acquisition of a repeat sequence; - indicates the loss of a repeat sequence; within circles the numbers of the strains of each CC appear between brackets. In summary, the analysis identified a single clonal complex ( spa -CC223) comprising spa types t223, t14339, t3689, and t8506; n = 20 isolates, and accounted for 58.8% of all tested MRSA isolates, as well as 3 singletons (t267, t084, and t1339; n = 12 isolates, 35.2%), while excluded 2 isolates (t380, 5.8%) from the clustering, as they consisted of four repeat units only.

Article Snippet: This analysis was performed using the Based Upon Repeat Pattern (BURP) algorithm of the Ridom StaphType software (Ridom GmbH, Würzburg, Germany) at a cost setting of ≤ 5 and excluding spa -types with 5 or fewer repeats.

Techniques: Software, Sequencing, Mutagenesis